Datasets

eCLIP/HITS-CLIP Dataset
A collection of 261 RNA-RBP interaction datasets across six human cell lines (K562, HepG2, HEK293, HEK293T, HeLa, and H9).
Size: ~657.1 MB | Format: ZIP
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Variant Datasets
FASTA inputs for variant-aware inference on trait-associated SNPs.
Size: ~10.6 MB | Format: TAR.GZ
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Models

BRIDGE Models
Trained BRIDGE model weights for RNA-binding protein interaction prediction.
Size: ~17.2 GB | Format: TAR.GZ
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RBPformer
Base-level attention architecture implementation for RNA-binding protein analysis.
Size: ~68.8 MB | Format: ZIP
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Tools & Resources

Motif Prior
Motif prior data for RBP in different cell lines.
Size: ~837.9 MB | Format: RAR
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Extracted Motif
Motifs identified from the BRIDGE model across multiple cell lines and RBPs.
Size: ~38.3 MB | Format: ZIP
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Open Source Code

BRIDGE on GitHub

BRIDGE is an open-source project. Visit our GitHub repository to access the source code, report issues, or contribute to the project.

View on GitHub